rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Summary

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Authors: Alexander M. Wailan; Francesc Coll; Eva Heinz; Gerry Tonkin-Hill; Jukka Corander; Jukka Corander; Jukka Corander; Nicholas A. Feasey; Nicholas A. Feasey; Nicholas R. Thomson; Nicholas R. Thomson

Journal title: Microbial Genomics

Journal number: 20

Journal publisher: Microbiology Society

Published year: 2019

DOI identifier: 10.1101/404624

ISSN: 2057-5858