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A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Automated Object Tracking for Animal Behaviour Studies

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Public release of the meta-genomic analysis platform

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Technical reports and Platform Integration of WP3 pipelines

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Implementation of Software platform

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

An Integrative Framework for Functional Analysis of Cattle Rumen Microbiomes

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

A Comprehensive Study on Predicting Functional Role of Metagenomes Using Machine Learning Methods

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Improving the Inference of Co-occurrence Networks in the Bovine Rumen Microbiome

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Phy-PMRFI: Phylogeny-Aware Prediction of Metagenomic Functions Using Random Forest Feature Importance

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

A Metagenomic Content and Knowledge Management Ecosystem Platform

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

An Interface to Heterogeneous Data Sources Based on the Mediator/Wrapper Architecture in the Hadoop Ecosystem

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

PAAM-ML: A novel Phylogeny and Abundance aware Machine Learning Modelling Approach for Microbiome Classification

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

An Integrative Approach for the Functional Analysis of Metagenomic Studies

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Integrated metagenomic analysis of the rumen microbiome of cattle reveals key biological mechanisms associated with meth...

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Phylogeny-Aware Deep 1-Dimensional Convolutional Neural Network for the Classification of Metagenomes

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

A network analysis of methane and feed conversion genes in the rumen microbial community

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Microbial abundance analysis and phylogenetic adoption in functional metagenomics

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Microbial co-presence and mutual-exclusion networks in the Bovine rumen microbiome

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

A metagenomics analysis of rumen microbiome

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Academic papers & technical reports

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Publications

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Periodic Reporting for period 2 - MetaPlat (Development of an Easy-to-use Metagenomics Platform for Agricultural Science...

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Current Algorithm evolution – Review/position publication

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Technical reports and Platform Integration of WP4 pipelines

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Academic Papers

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Academic papers on changes in rumen microbial population due to chronic stress

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Technical reports and Platform Integration of WP2 results and databases

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Submission to EBI ENA database of the raw sequence files

Project: MetaPlat

Updated at: 28-04-2024

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Project acronym MetaPlat

Resources

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A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome

A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites

Automated Object Tracking for Animal Behaviour Studies

Public release of the meta-genomic analysis platform

Technical reports and Platform Integration of WP3 pipelines

Implementation of Software platform

An Integrative Framework for Functional Analysis of Cattle Rumen Microbiomes

A Comprehensive Study on Predicting Functional Role of Metagenomes Using Machine Learning Methods

Improving the Inference of Co-occurrence Networks in the Bovine Rumen Microbiome

Phy-PMRFI: Phylogeny-Aware Prediction of Metagenomic Functions Using Random Forest Feature Importance

A Metagenomic Content and Knowledge Management Ecosystem Platform

An Interface to Heterogeneous Data Sources Based on the Mediator/Wrapper Architecture in the Hadoop Ecosystem

PAAM-ML: A novel Phylogeny and Abundance aware Machine Learning Modelling Approach for Microbiome Classification

An Integrative Approach for the Functional Analysis of Metagenomic Studies

Integrated metagenomic analysis of the rumen microbiome of cattle reveals key biological mechanisms associated with meth...

Phylogeny-Aware Deep 1-Dimensional Convolutional Neural Network for the Classification of Metagenomes

A network analysis of methane and feed conversion genes in the rumen microbial community

Microbial abundance analysis and phylogenetic adoption in functional metagenomics

Microbial co-presence and mutual-exclusion networks in the Bovine rumen microbiome

A metagenomics analysis of rumen microbiome

Academic papers & technical reports

Publications

Periodic Reporting for period 2 - MetaPlat (Development of an Easy-to-use Metagenomics Platform for Agricultural Science...

Current Algorithm evolution – Review/position publication

Technical reports and Platform Integration of WP4 pipelines

Academic Papers

Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches

Academic papers on changes in rumen microbial population due to chronic stress

Technical reports and Platform Integration of WP2 results and databases

Submission to EBI ENA database of the raw sequence files