ERD

Periodic Reporting for period 4 - ReservoirDOCs (The evolutionary dynamics of pathogen emergence and establishment: from...

Project: ReservoirDOCs

Updated at: 31-05-2024

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Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2

Project: ReservoirDOCs

Updated at: 27-04-2024

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Massive Parallelization Boosts Big Bayesian Multidimensional Scaling

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Updated at: 27-04-2024

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Quantifying rates of HIV-1 flow between risk groups and geographic locations in Kenya: A country-wide phylogenetic study

Project: ReservoirDOCs

Updated at: 27-04-2024

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In Vivo Therapy with M2e-Specific IgG Selects for an Influenza A Virus Mutant with Delayed Matrix Protein 2 Expression.

Project: ReservoirDOCs

Updated at: 27-04-2024

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Phylogenomic Characterization of Lopma Virus and Praja Virus, Two Novel Rodent-Borne Arteriviruses.

Project: ReservoirDOCs

Updated at: 27-04-2024

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Detection of Marburg Virus Disease in Guinea

Project: ReservoirDOCs

Updated at: 27-04-2024

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Relaxed random walks at scale

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Updated at: 27-04-2024

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Principled, practical, flexible, fast: A new approach to phylogenetic factor analysis

Project: ReservoirDOCs

Updated at: 27-04-2024

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Gradients do grow on trees: a linear-time ${\cal O}\hspace{-0.2em}\left( N \right)$-dimensional gradient for statistical...

Project: ReservoirDOCs

Updated at: 27-04-2024

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Measles virus and rinderpest virus divergence dated to the sixth century BCE

Project: ReservoirDOCs

Updated at: 27-04-2024

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Comparing patterns and scales of plant virus phylogeography: Rice yellow mottle virus in Madagascar and in continental A...

Project: ReservoirDOCs

Updated at: 27-04-2024

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Analyses of Early ZIKV Genomes Are Consistent with Viral Spread from Northeast Brazil to the Americas

Project: ReservoirDOCs

Updated at: 27-04-2024

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Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian p...

Project: ReservoirDOCs

Updated at: 27-04-2024

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Bayesian Evaluation of Temporal Signal in Measurably Evolving Populations

Project: ReservoirDOCs

Updated at: 27-04-2024

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Phylogeography of Lassa Virus in Nigeria

Project: ReservoirDOCs

Updated at: 27-04-2024

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Scalable Bayesian phylogenetics

Project: ReservoirDOCs

Updated at: 27-04-2024

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Uncovering the endemic circulation of rabies in Cambodia

Project: ReservoirDOCs

Updated at: 27-04-2024

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Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa

Project: ReservoirDOCs

Updated at: 27-04-2024

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Assessing the role of live poultry trade in community-structured transmission of avian influenza in China

Project: ReservoirDOCs

Updated at: 27-04-2024

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Divergence dating using mixed effects clock modelling: An application to HIV-1

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Updated at: 27-04-2024

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HIV Rebound Is Predominantly Fueled by Genetically Identical Viral Expansions from Diverse Reservoirs

Project: ReservoirDOCs

Updated at: 27-04-2024

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BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogen...

Project: ReservoirDOCs

Updated at: 27-04-2024

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Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen.

Project: ReservoirDOCs

Updated at: 27-04-2024

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In Search of Covariates of HIV-1 Subtype B Spread in the United States—A Cautionary Tale of Large-Scale Bayesian Phylo...

Project: ReservoirDOCs

Updated at: 27-04-2024

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Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza

Project: ReservoirDOCs

Updated at: 27-04-2024

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Bayesian Inference of Evolutionary Histories under Time-Dependent Substitution Rates

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Updated at: 27-04-2024

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Online Bayesian phylodynamic inference in BEAST with application to epidemic reconstruction

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Updated at: 27-04-2024

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Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

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Updated at: 27-04-2024

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Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

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Updated at: 27-04-2024

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Project acronym ReservoirDOCs

Resources

Selected filters:

Periodic Reporting for period 4 - ReservoirDOCs (The evolutionary dynamics of pathogen emergence and establishment: from...

Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2

Massive Parallelization Boosts Big Bayesian Multidimensional Scaling

Quantifying rates of HIV-1 flow between risk groups and geographic locations in Kenya: A country-wide phylogenetic study

In Vivo Therapy with M2e-Specific IgG Selects for an Influenza A Virus Mutant with Delayed Matrix Protein 2 Expression.

Phylogenomic Characterization of Lopma Virus and Praja Virus, Two Novel Rodent-Borne Arteriviruses.

Detection of Marburg Virus Disease in Guinea

Relaxed random walks at scale

Principled, practical, flexible, fast: A new approach to phylogenetic factor analysis

Gradients do grow on trees: a linear-time ${\cal O}\hspace{-0.2em}\left( N \right)$-dimensional gradient for statistical...

Measles virus and rinderpest virus divergence dated to the sixth century BCE

Comparing patterns and scales of plant virus phylogeography: Rice yellow mottle virus in Madagascar and in continental A...

Analyses of Early ZIKV Genomes Are Consistent with Viral Spread from Northeast Brazil to the Americas

Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian p...

Bayesian Evaluation of Temporal Signal in Measurably Evolving Populations

Phylogeography of Lassa Virus in Nigeria

Scalable Bayesian phylogenetics

Uncovering the endemic circulation of rabies in Cambodia

Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa

Assessing the role of live poultry trade in community-structured transmission of avian influenza in China

Divergence dating using mixed effects clock modelling: An application to HIV-1

HIV Rebound Is Predominantly Fueled by Genetically Identical Viral Expansions from Diverse Reservoirs

BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogen...

Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen.

In Search of Covariates of HIV-1 Subtype B Spread in the United States—A Cautionary Tale of Large-Scale Bayesian Phylo...

Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza

Bayesian Inference of Evolutionary Histories under Time-Dependent Substitution Rates

Online Bayesian phylodynamic inference in BEAST with application to epidemic reconstruction

Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak