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Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plant...

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

A comprehensive and high-quality collection of Escherichia coli genomes and their genes

Project: SCARABEE

Updated at: 27-04-2024

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Adaptive Approximate Bayesian Computation Tolerance Selection

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Updated at: 27-04-2024

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gplas : a comprehensive tool for plasmid analysis using short-read graphs

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Updated at: 27-04-2024

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Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Likelihood-Free Inference with Deep Gaussian Processes

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Updated at: 27-04-2024

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rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Project: SCARABEE

Updated at: 27-04-2024

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Different evolutionary trends form the twilight zone of the bacterial pan-genome

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Updated at: 27-04-2024

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Bayesian inference of atomistic structure in functional materials

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Updated at: 27-04-2024

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Producing polished prokaryotic pangenomes with the Panaroo pipeline

Project: SCARABEE

Updated at: 27-04-2024

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Fast hierarchical Bayesian analysis of population structure

Project: SCARABEE

Updated at: 27-04-2024

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High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

pyseer: a comprehensive tool for microbial pangenome-wide association studies

Project: SCARABEE

Updated at: 27-04-2024

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PANINI: Pangenome Neighbour Identification for Bacterial Populations

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Updated at: 27-04-2024

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Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence

Project: SCARABEE

Updated at: 27-04-2024

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Bacmeta: simulator for genomic evolution in bacterial metapopulations

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Updated at: 27-04-2024

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Inverse finite-size scaling for high-dimensional significance analysis

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Updated at: 27-04-2024

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ELFI: Engine for Likelihood-Free Inference

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Updated at: 27-04-2024

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Gene exchange drives the ecological success of a multi-host bacterial pathogen

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Updated at: 27-04-2024

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Project acronym SCARABEE

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

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Updated at: 27-04-2024

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Resolving outbreak dynamics using approximate Bayesian computation for stochastic birth–death models

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Updated at: 27-04-2024

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Genome-wide epistasis and co-selection study using mutual information

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Updated at: 27-04-2024

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Weak Epistasis May Drive Adaptation in Recombining Bacteria

Project: SCARABEE

Updated at: 27-04-2024

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Fast and flexible bacterial genomic epidemiology with PopPUNK

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Updated at: 27-04-2024

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The impact of antimicrobials on gonococcal evolution

Project: SCARABEE

Updated at: 27-04-2024

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RhierBAPS: An R implementation of the population clustering algorithm hierBAPS

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyo...

Project: SCARABEE

Updated at: 27-04-2024

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Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Freque...

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Machine learning accelerated likelihood-free event reconstruction in dark matter direct detection

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Updated at: 27-04-2024

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Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plant...

A comprehensive and high-quality collection of Escherichia coli genomes and their genes

Adaptive Approximate Bayesian Computation Tolerance Selection

gplas : a comprehensive tool for plasmid analysis using short-read graphs

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

Likelihood-Free Inference with Deep Gaussian Processes

rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Different evolutionary trends form the twilight zone of the bacterial pan-genome

Bayesian inference of atomistic structure in functional materials

Producing polished prokaryotic pangenomes with the Panaroo pipeline

Fast hierarchical Bayesian analysis of population structure

High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study

pyseer: a comprehensive tool for microbial pangenome-wide association studies

PANINI: Pangenome Neighbour Identification for Bacterial Populations

Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence

Bacmeta: simulator for genomic evolution in bacterial metapopulations

Inverse finite-size scaling for high-dimensional significance analysis

ELFI: Engine for Likelihood-Free Inference

Gene exchange drives the ecological success of a multi-host bacterial pathogen

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

Resolving outbreak dynamics using approximate Bayesian computation for stochastic birth–death models

Genome-wide epistasis and co-selection study using mutual information

Weak Epistasis May Drive Adaptation in Recombining Bacteria

Fast and flexible bacterial genomic epidemiology with PopPUNK

The impact of antimicrobials on gonococcal evolution

RhierBAPS: An R implementation of the population clustering algorithm hierBAPS

Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyo...

Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Freque...

Machine learning accelerated likelihood-free event reconstruction in dark matter direct detection