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The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Adaptive Approximate Bayesian Computation Tolerance Selection

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

gplas : a comprehensive tool for plasmid analysis using short-read graphs

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plant...

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

A comprehensive and high-quality collection of Escherichia coli genomes and their genes

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Bacmeta: simulator for genomic evolution in bacterial metapopulations

Project: SCARABEE

Updated at: 27-04-2024

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Inverse finite-size scaling for high-dimensional significance analysis

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

ELFI: Engine for Likelihood-Free Inference

Project: SCARABEE

Updated at: 27-04-2024

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Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Freque...

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Resolving outbreak dynamics using approximate Bayesian computation for stochastic birth–death models

Project: SCARABEE

Updated at: 27-04-2024

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Producing polished prokaryotic pangenomes with the Panaroo pipeline

Project: SCARABEE

Updated at: 27-04-2024

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High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study

Project: SCARABEE

Updated at: 27-04-2024

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Genome-wide epistasis and co-selection study using mutual information

Project: SCARABEE

Updated at: 27-04-2024

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Fast hierarchical Bayesian analysis of population structure

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Bayesian inference of atomistic structure in functional materials

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Different evolutionary trends form the twilight zone of the bacterial pan-genome

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Likelihood-Free Inference with Deep Gaussian Processes

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Gene exchange drives the ecological success of a multi-host bacterial pathogen

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Fast and flexible bacterial genomic epidemiology with PopPUNK

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

RhierBAPS: An R implementation of the population clustering algorithm hierBAPS

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

The impact of antimicrobials on gonococcal evolution

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyo...

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Machine learning accelerated likelihood-free event reconstruction in dark matter direct detection

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

Weak Epistasis May Drive Adaptation in Recombining Bacteria

Project: SCARABEE

Updated at: 27-04-2024

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Project acronym SCARABEE

pyseer: a comprehensive tool for microbial pangenome-wide association studies

Project: SCARABEE

Updated at: 27-04-2024

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PANINI: Pangenome Neighbour Identification for Bacterial Populations

Project: SCARABEE

Updated at: 27-04-2024

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The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

Adaptive Approximate Bayesian Computation Tolerance Selection

gplas : a comprehensive tool for plasmid analysis using short-read graphs

Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plant...

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

A comprehensive and high-quality collection of Escherichia coli genomes and their genes

Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence

Bacmeta: simulator for genomic evolution in bacterial metapopulations

Inverse finite-size scaling for high-dimensional significance analysis

ELFI: Engine for Likelihood-Free Inference

Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Freque...

Resolving outbreak dynamics using approximate Bayesian computation for stochastic birth–death models

Producing polished prokaryotic pangenomes with the Panaroo pipeline

High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study

Genome-wide epistasis and co-selection study using mutual information

Fast hierarchical Bayesian analysis of population structure

rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Bayesian inference of atomistic structure in functional materials

Different evolutionary trends form the twilight zone of the bacterial pan-genome

Likelihood-Free Inference with Deep Gaussian Processes

Gene exchange drives the ecological success of a multi-host bacterial pathogen

Fast and flexible bacterial genomic epidemiology with PopPUNK

RhierBAPS: An R implementation of the population clustering algorithm hierBAPS

The impact of antimicrobials on gonococcal evolution

Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyo...

Machine learning accelerated likelihood-free event reconstruction in dark matter direct detection

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

Weak Epistasis May Drive Adaptation in Recombining Bacteria

pyseer: a comprehensive tool for microbial pangenome-wide association studies

PANINI: Pangenome Neighbour Identification for Bacterial Populations